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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.466NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.466NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.489NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.489NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.363NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.363NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.379NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.379NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.78NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.231NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.231NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.49NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.67NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
N.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
N.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XANWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AZ.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AZ.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.114NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.114NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.199NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.199NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.112.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.112.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.360NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.360NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.49NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-3484.59South Korea
B.1.177.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-2683.5South Korea
B.1.1.347NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.347NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.195NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.195NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.321NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.321NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AA.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AA.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.505NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.505NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.74NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-6431.9South Korea
B.1.1.74NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.406NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.406NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used