Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.5.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CV.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBKNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBKNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.14.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.14.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBK.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.79NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.79NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FD.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.25.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.25.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.63NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.63NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DU.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.53NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.381NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.381NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AE.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.516NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.516NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.526NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used