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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GK.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XENWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XENWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GP.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBVNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBVNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.42NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
K.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
K.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.56NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.41NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
BA.2.72NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.20NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.73NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.73NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDZNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XEBNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XEBNWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
B.1.302NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.302NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.222NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.222NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.434NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.434NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.467NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.467NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.110.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used