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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GA.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.74NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.74NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.25NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.237NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.237NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBNNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBNNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBJ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.356NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.356NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17028.5South Korea
XBB.1.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.320NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.320NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.33NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.635NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.635NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.21NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.35NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EL.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.44NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FU.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GL.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GL.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.78NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.45NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used