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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBFNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.11.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.43NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.85NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.85NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.66 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.66 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.72 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.72 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.133 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.133 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.5.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.5.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.497NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.497NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EN.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EN.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.30 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.30 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.85 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.85 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.6.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.513NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.31NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.4.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HN.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XACNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XACNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XZNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.289NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.289NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.7.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDHNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDHNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.15.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
EG.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used