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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.44.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
FL.37NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.45.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.45.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MH.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
MH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.3.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LB.1.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LB.1.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LB.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.25NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.33NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GP.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.3.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.4.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17028.5South Korea
KP.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
KP.3.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.3.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.65.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.65.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LF.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LF.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDVNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDVNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.2.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.25 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.25 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.25.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.25.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.25.3 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used