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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.353NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.407NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.407NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.254NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.254NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.39.1.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.39.1.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.418NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.418NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.9.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.9.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.40NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.122NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.122NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BM.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.20NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.77NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CP.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FC.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.1.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DN.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.51NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.51NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XRNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XRNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.350.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.350.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.59NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.177.67NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.67NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.277NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-211.894South Korea
B.1.277NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
BY.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BY.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used