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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AA.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.241NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.241NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.521NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.521NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.383NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.383NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.117NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.117NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.157NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.157NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.187NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.187NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.30NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.69NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.69NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.26NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.87NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.87NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.39.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.39.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AD.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.201NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.201NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.104NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.104NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.258.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.225NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.225NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
A.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AV.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-14372.8South Korea
AV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.171NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used