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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.620NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.620NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDMNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDMNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.30NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BV.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.4.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.7.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XWNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XWNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-18487.6South Korea
GA.4.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.3.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.73 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.73 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.60 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.60 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.124.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.124.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.45NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
GP.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBQNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBQNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.6.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.6.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CR.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used