Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.306NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.328NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.328NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
A.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.533NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.533NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.525NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.525NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.480NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.480NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.236NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.236NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.153NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.153NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.302NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.302NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.194NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.194NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.34.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.34.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.50NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.60NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.52NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
W.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
W.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
V.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
V.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.149NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.149NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.413NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.413NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.258.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.9.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.9.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.107NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.107NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.76NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.76NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.301NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used