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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.418NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.389NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.389NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.53NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.363NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.363NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.401NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.401NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.362NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.362NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HN.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.312NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.312NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.220NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.220NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.142NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.142NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.523NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.523NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.106 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.106 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.346NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.346NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.93NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.93NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.512NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.512NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.349NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.349NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.265NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.265NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19749.2South Korea
B.1.36.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.599NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.599NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19777.6South Korea
B.1.1.128NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.128NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.451NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used