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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FY.1.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBLNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBLNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EK.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EK.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.466.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.466.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BS.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BS.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.75.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CA.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.453NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.453NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HV.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.405NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.405NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.282NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.282NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.228NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17723.5South Korea
B.1.1.228NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.174NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17723.5South Korea
B.1.1.174NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.88 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.88 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
EG.2.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DN.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.3.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.4.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BW.1.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BW.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.36.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
B.1.1.418NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used