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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.551NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.207NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.207NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.604NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.604NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
W.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
W.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.565NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.565NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.361NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.361NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19194.1South Korea
B.1.1.101NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.101NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.478NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.478NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.86NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.86NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.216NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.216NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.471NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.471NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.420NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.420NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
L.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
L.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.10.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.10.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HG.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HG.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FD.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.44NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.26NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GN.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used