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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.111NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.619NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.619NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.36.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.36.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.23.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
A.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.316NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.316NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.585NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.585NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.351NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.351NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.243NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.243NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
R.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
R.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.561NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.561NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.605NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.605NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.596NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.596NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.543NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.543NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.139NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.139NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.31NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.221NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.221NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.362NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.362NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.265NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.265NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.518NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.518NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.551NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used