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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.37 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.336NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.336NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FG.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FG.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GN.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.413NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.413NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.5.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JD.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.38 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.38 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.595.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.595.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.340NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.340NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.437NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.437NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.452NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.452NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.400NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.400NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.294NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.294NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.81NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.81NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HV.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KK.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.3.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HH.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.22.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-21208.1South Korea
XBB.1.22.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HW.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HW.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used