Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.16.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.46NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GB.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.72NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HH.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.3.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.9.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDBNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDBNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.35NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FE.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.30NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.6.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.6.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FK.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used