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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FL.18.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
EG.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.21NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.568NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.568NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19194.1South Korea
P.1.13 (Gamma)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
P.1.13 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.372NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.372NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.634NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.634NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.37.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.37.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.49NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBL.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FR.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.42NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GR.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.4.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JF.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used