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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BF.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CA.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.587NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.587NWon-NGTTGCGACTACGTGATGAGG20552884928830R-2825.07South Korea
B.1.232NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.232NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
BA.5.2.60NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CD.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DR.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DR.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.26NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DG.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.56NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.2.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDP.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
DE.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.333NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.333NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
CM.6.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.54NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used