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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.54NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.120 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.120 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDK.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDK.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LL.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.172NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.172NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.110NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.110NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.320NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.320NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
A.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.10.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.107NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.107NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used