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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HH.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EM.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.93NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.93NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.25NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.26NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17028.5South Korea
FL.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-18648.1South Korea
HK.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GM.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GM.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GV.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used