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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
A.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.530SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.530SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.17.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.17.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.75.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.75.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.570SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.570SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.633SWon-SCTACATGCACCAGCAACTGT20502311423133F-12026.7South Korea
B.1.633SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DD.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.136SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.136SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.50SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.36SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.38.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.38.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N/ASWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
N/ASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAYSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAYSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAESWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.467SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.467SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.484SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.484SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.139SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.139SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.508SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.508SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.94SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.94SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.463SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.463SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.357SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.357SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.318SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used