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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.336SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.400.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.400.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.537SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.537SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.548SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.548SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.24.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.24.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.492SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.492SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.188SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.188SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.50SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.494SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.494SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.167SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.167SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.267SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.267SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.485SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.485SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.119SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.119SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.276SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.276SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.111SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.111SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.73SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DW.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BR.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.2.75.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAKSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAASWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.595.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.595.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.76.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used