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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.258.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.37SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.319SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.319SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.540SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.540SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.487SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.487SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.118SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.118SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.501SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.501SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.226SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.226SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.130SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.130SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.444SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.444SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AW.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.268SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.268SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.344SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.344SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.103SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.103SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.506SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.506SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.6.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.6.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.438.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-20338.9South Korea
B.1.438.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-11836.9South Korea
B.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.165SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.165SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.554SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.554SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.243.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.2.5.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.2.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.450SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.450SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.336SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used