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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.171SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.16SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.57SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.57SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.67SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.67SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.279SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.279SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.67SWon-SCTACATGCACCAGCAACTGT20502311423133F-3222.64South Korea
B.1.1.67SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.10 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.10 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.286SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.286SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.369SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.369SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.105SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.105SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
B.1.177.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.258.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.307SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.307SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.560SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.560SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.610SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.610SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.98SWon-SCTACATGCACCAGCAACTGT20502311423133F-10681.4South Korea
B.1.1.98SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.566SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.566SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.480SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.480SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.579SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used