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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.328SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
A.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-2575.96South Korea
B.1.533SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.533SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.525SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.525SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.480SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.480SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.236SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.236SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21797.8South Korea
B.1.1.153SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.153SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.302SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.302SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.194SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.194SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.34.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-10681.4South Korea
AY.34.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.50SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.60SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.52SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.52SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
W.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
W.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
V.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
V.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.149SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.149SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.413SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.413SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.9.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.9.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.107SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.107SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.76SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.76SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.301SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.301SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.269SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used