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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JB.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDK.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XDK.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.58SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.58SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.1.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.4.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.459SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.459SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.117SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.117SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.381SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.381SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.237SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.237SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.382SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.382SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.395SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.395SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.41SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.90 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.90 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.1.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.87SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.87SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.8 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.4.8 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.617.1 (Kappa)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.617.1 (Kappa)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.3 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.4.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.46.5 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.46.5 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.4.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.16 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used