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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
W.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.10 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.4.10 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.47NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.76NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.76NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.301NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.301NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.269NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.269NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.234NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.234NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BV.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.4.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.7.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XWNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XWNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-21208.1South Korea
XBB.1.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XYNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.2.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.45NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
GP.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBQNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used