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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HN.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XACNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XACNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XZNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.273NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.273NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.13 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.4.13 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.358NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.358NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.60NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.159NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.159NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.141NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.141NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.591NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.591NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.468NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.468NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.131 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.131 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.586NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.586NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.424NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.424NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.61NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.264NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.264NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.581NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.581NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19194.1South Korea
B.1.330NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.330NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.495NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.495NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.294NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.294NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.453NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.453NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.44NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.350NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used