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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.429NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.289NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.289NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.7.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDHNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDHNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.15.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
EG.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.366NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.366NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.380NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.380NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.148NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.148NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.382NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.382NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.356NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.356NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.376NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.376NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.607NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.607NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.163NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.163NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.337NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.337NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.158NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.158NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.602NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.602NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.510NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.510NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.91NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.91NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.227NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.227NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.555NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.555NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.513NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.513NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.31NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.4.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used