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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HN.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KL.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.24.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.24.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-22305.6South Korea
GK.2.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-22305.6South Korea
FL.1.5.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.1.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HE.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ED.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
ED.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.587NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.587NWon-NGTTGCGACTACGTGATGAGG20552884928830R-2825.07South Korea
B.1.232NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.232NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
BA.5.2.60NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CD.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.258NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.258NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.426NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.426NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.399NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.399NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.337NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.337NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.539NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.539NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.35NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.210NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.210NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used