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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.5.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CU.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CA.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.83NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.83NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
XBB.1.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.68NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.68NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.26NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BR.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.25NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.51NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.51NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XSNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XSNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.40NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.25NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
XBB.1.5.74NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.74NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.6.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.6.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.238NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.238NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.4.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DS.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.58NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used