Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
KP.2.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LQ.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LQ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LY.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MD.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
MD.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MK.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
MK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.23.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.64NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.64NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.68NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.68NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.65 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.65 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.466NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.466NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
L.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
L.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JV.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.10.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.10.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.36NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used