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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.5.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FH.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CJ.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CJ.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HZ.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HZ.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.69NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.69NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.98NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.98NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.71NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.71NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17723.5South Korea
FK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17723.5South Korea
CH.1.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HD.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HD.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HQ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FD.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.26.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.26.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FK.1.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used