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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
DW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BR.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.75.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAKNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAKNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAANWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.136NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.136NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAYNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DJ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAENWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAENWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.467NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.467NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.484NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.484NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N/ANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N/ANWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.515NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.515NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
B.1.258.23NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.258.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
B.1.370NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.370NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.118NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.118NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.137NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.137NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.309NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.309NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.157NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.157NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.176NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.176NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.3.4 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.3.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.391NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.391NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.393NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.393NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.432NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.432NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.388NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.388NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used