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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
CK.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.34NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.129 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.129 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.8.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BZ.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BZ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.10.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.44NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EA.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DH.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XGNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XGNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.3.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used