Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.5.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.1.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JF.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.3.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDENWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDENWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
KE.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KE.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HY.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
JC.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JC.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.105NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.105NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.9.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GN.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.8.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.8.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HB.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.10.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.89NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.89NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HR.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HP.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HP.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GW.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
GS.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCF.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.34NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.15.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
GJ.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.21NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used