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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.53 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.599NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.599NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19777.6South Korea
B.1.1.128NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.128NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.451NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.451NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCGNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCGNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.30NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DT.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DT.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DT.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DT.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BM.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBENWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBENWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.4.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BE.1.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.3.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.3.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.3.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JC.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.564NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.564NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.617NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used