Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HK.3.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCUNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCUNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.27.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.27.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KB.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19777.6South Korea
BF.7.14.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.14.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DY.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DY.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.14.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.14.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.14.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-18648.1South Korea
FL.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HL.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HL.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.42.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.42.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DZ.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DZ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used