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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XDVNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.100 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.100 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.44 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.44 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LD.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KW.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.7.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.7.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.2.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KR.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KR.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.49NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MF.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
MF.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.29.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.29.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.44NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDK.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.42.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LA.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KP.2.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDV.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used