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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.6.6EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.37EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.37EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.511EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.511EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.428.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.428.1EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.506EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.506EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.482EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.482EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.335EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.335EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.36.36EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.36EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.145EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.145EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.547EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.547EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.247EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.247EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.4.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.6EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.205EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.205EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.110EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.110EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.381EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.381EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
C.32EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.32EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AE.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.8EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.516EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.516EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.526EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.526EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.279EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.279EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.187EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.187EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
D.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
D.3EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AE.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.2EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.110.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.110.1EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.342EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.342EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.500EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used