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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
CH.1.1.24EWon-ECACACAATCGATGCGCAGTA20502636526346R-463.749South Korea
BA.5.2.43EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.5.2.43EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
BA.5.2.19EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.5.2.19EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
BF.38.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.38.3EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.483EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.483EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.181EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.181EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.113EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.113EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.594EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.594EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.328EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.328EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.13EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.13EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.283EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.283EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
BE.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BE.12EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.96EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.96EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
L.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
L.2EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.310EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.310EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AY.112.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.112.1 (Delta)EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.360EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.360EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.177.49EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.49EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.347EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.347EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.195EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.195EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.321EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.321EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.505EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.505EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.74EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-3870.9South Korea
B.1.1.74EWon-ECACACAATCGATGCGCAGTA20502636526346R-463.749South Korea
B.1.406EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.406EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.115EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.115EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.29EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used