Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GM.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FT.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HT.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.34.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.2.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.106NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FT.3.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.73NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.8.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDRNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-22305.6South Korea
JN.1.43.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.7.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-22305.6South Korea
JN.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDPNWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
KP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used