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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.85NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.65NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BG.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.74NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDCNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
JR.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
JD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.26.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCPNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.6.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDENWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
KE.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HF.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used