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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.119NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.160NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.447NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.110.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.180NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.155NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.92NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.145NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.120NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.504NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.201NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.221NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.410NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.411NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.513NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.338NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.284NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.9.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.498NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.184NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.187NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.110.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.342NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.500NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.511NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.428.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.506NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.482NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.335NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.499.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.116NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.134NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.393NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.381NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.516NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.526NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.279NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.51NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XATNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used