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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.330NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.205NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.177NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.301NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.308NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.210NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.325NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.590NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.116NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.496NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.49 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.74NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.237NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBNNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.356NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.462NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.147NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.6 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.5 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.4 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.420NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
XBB.2.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.39.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.233NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.320NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.635NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.19 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AM.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.15 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.113NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.98.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.34.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.124.1.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.203NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.8.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used