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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
DV.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.11.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-10601.4South Korea
GJ.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HJ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.101SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.31SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GB.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-20112South Korea
FY.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.4.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FP.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FG.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.59SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GA.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.67SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.2.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.88SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.48SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.25SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.42SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.69SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.70SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.31SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.41SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.46SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CP.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.25SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CR.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.2.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used