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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AW.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.268SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.344SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.103SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.485SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.119SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.276SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.111SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.336SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.400.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.537SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.548SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.24.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.492SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.540SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.487SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.118SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.357SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BP.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.46SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.530SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.17.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.75.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.570SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.633SWon-SCTACATGCACCAGCAACTGT20502311423133F-12026.7South Korea
DD.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.136SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAYSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DJ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAESWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.467SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.484SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.476SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.404SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CV.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DJ.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.73SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DW.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BR.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.75.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
XAKSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAASWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used