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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.5.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.109SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.361SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.38SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.417SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AM.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.37SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.319SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.182SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.430SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.331SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.112.3 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.37SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
N.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.515SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.287SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.431SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.170SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.506SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.6.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.438.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-20338.9South Korea
B.1.1.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-11836.9South Korea
B.1.188SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.501SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.226SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.546SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.194SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.429.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
P.1.9 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.25.1.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.203SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.157SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.176SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.3.4 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.391SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.393SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.432SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.388SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.48SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.112SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.274SWon-SCTACATGCACCAGCAACTGT20502311423133F-10601.4South Korea
B.1.515SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used