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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.437SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.371SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.6.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HU.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.1.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
KJ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JC.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.625SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HD.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GY.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HH.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
B.1.595.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.495SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.294SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.453SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.350SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.304SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.315SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.516SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.354SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.162SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.426SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.402SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.424SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.61SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.264SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.581SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.330SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.205SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.177SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.301SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.308SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.210SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.325SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.590SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.116SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.496SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.438.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.49 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.15.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.16.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.273SWon-SCTACATGCACCAGCAACTGT20502311423133F-20338.9South Korea
AY.4.13 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.358SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.60SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.159SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used