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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.25SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.237SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBNSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBJ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.356SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.462SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.147SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.6 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.5 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.4 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.420SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.39.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EK.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.233SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.320SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.33SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.635SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.19 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
N.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AM.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.15 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.113SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GA.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.423SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.160.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AT.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.619.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.12.1 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AZ.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.260SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.456SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.160.16SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.4.16 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.70SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.42SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.428SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.374SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.63 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.377SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used